Insertion junction: CLIP2.067655_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067655
Chromosome:chromosome 17
Location:254385
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g697600 (1 of 274) IPR020683 - Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTGGAGCCTGCGCGCTCCGGCGACCTGCTCACGCTGCGAGCCCTGGG
Internal bar code:CTGGACCGGTTTACAATTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:460
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCACTACTGCACGACAC
Suggested primer 2:CGACACAGACAGCTTCAGGT