Insertion junction: CLIP2.067659_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067659
Chromosome:chromosome 17
Location:282136
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697850 (1 of 226) IPR012337 - Ribonuclease H-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCACACGCCCGGCAATGCCAGCCCATGCCTCTTGCATCGCCCGGATGGA
Internal bar code:GGGGTGTGAAATTTTAGACTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:6350
LEAP-Seq percent confirming:29.6296
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGAACCACTCGCACTCAG
Suggested primer 2:CCAGGTTGTGCGAAACAGTG