Insertion junction: CLIP2.067667_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067667
Chromosome:chromosome 3
Location:6571650
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194535 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCAGGTCGCGGGGAATCGCGGATGAAAGGGCGGGGCAAGGGCGACGGG
Internal bar code:GGATGTCTCTGTCAGCAGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5472
LEAP-Seq percent confirming:23.1579
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:73
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCGCCTTCGCTAACATGC
Suggested primer 2:GGTCGTACTCTCAGCTGTCG