Insertion junction: CLIP2.067671_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067671
Chromosome:chromosome 9
Location:5694054
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410350 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCGTGTTCGCGTGCCGTGCGTGACGTCTAGTGACTAGCGTGCGCAGAC
Internal bar code:GATCTATCCGGGGTTTAGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3056
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGGTGAGGTGAGGTGTG
Suggested primer 2:GCTGTTGCCTGATGAGGAGT