Insertion junction: CLIP2.067672_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067672
Chromosome:chromosome 8
Location:1536813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g365100 FAP242,CSE5 Coiled-Coil Flagellar Associated Protein 242 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCGCAGGCCGCGGCCCCTGGCGCAAGGGATGTTGCCATGGCTCACCGC
Internal bar code:CGCCATTAATTACGATGTCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3395
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCCGCTCTATGCCTCAG
Suggested primer 2:AGTGTTTTCGCTCGAGACGT