Insertion junction: CLIP2.067686_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067686
Chromosome:chromosome 9
Location:4537255
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401108 (1 of 274) IPR020683 - Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGTCGAGGAGGAGTGGCGGTGGGAGCAGGAGGAGCAGGAGTCGCTGC
Internal bar code:TGGAGCTAGGAGCTTCTAAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4119
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGGCTGGATCGCAATTT
Suggested primer 2:TTTGTCGAGCACTGCCTGAT