Insertion junction: CLIP2.067711_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067711
Chromosome:chromosome 2
Location:3663534
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g100100 (1 of 5) PTHR32467//PTHR32467:SF15 - FAMILY NOT NAMED // AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAAACTGAGGAAACCAGTGCTCCTGCTGTTGCTGCTGCTGCTGTTGTT
Internal bar code:TCGCATGCTTATAGCATAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2056
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCACACACATCACACACACC
Suggested primer 2:CCTAACCCCTGGCGCTAAAA