Insertion junction: CLIP2.067718_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067718
Chromosome:chromosome 11
Location:3109733
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475300 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGCGTACTTCGTCGTTGCGCCTGAGAGACTGCTGGCGTCTTCGGGGT
Internal bar code:CTCACTAGTAGTTCGCCTTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1504
LEAP-Seq percent confirming:76.3158
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGTTGCACTTCAGGTTG
Suggested primer 2:TCGGGTCTGTACCTTAGCGA