Insertion cassette: | CIB2 |
Side of cassette: | 3' truncated? |
Strand: | + |
Strain: | CLIP2.067727 |
Chromosome: | chromosome 1 |
Location: | 3711144 |
Confidence (%): | 80 |
Locus systematic id | Locus common name | Defline | Feature |
---|---|---|---|
Cre01.g024200 | (1 of 1) PTHR23139:SF8 - CLEAVAGE STIMULATION FACTOR 64 KILODALTON SUBUNIT | 3'UTR | |
Cre01.g024250 | HEL4 | DEAH box ATP-dependent RNA helicase; (1 of 1) 1.14.13.101 - Senecionine N-oxygenase / Senecionine monooxygenase (N-oxide-forming) | 3'UTR |
Insertion site details | |
Expected flanking sequence (starting at cassette; orientation from cassette outwards): | TTGCATGATTGTCGAGTGCGCACGCATGTAAGCTGCGTGGCCCTAAGGCA |
Internal bar code: | CGTGGGATGCCGATATGTAAGG |
Confirmation - LEAP-Seq | |
LEAP-Seq distance: | 836 |
LEAP-Seq percent confirming: | 62.5 |
LEAP-Seq n confirming: | 5 |
LEAP-Seq n nonconfirming: | 3 |
LEAP-Seq n unique pos: | 8 |
Suggested primers for confirmation by PCR | |
Suggested primer 1: | TGCATCACATTTCCGACGGA |
Suggested primer 2: | ATCACGCTCTCCCTCTCCTT |