Insertion junction: CLIP2.067742_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067742
Chromosome:chromosome 14
Location:1192390
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g615600 SDR35 (1 of 3) IPR007751//IPR029058 - Domain of unknown function DUF676, lipase-like // Alpha/Beta hydrolase fold; Short-chain dehydrogenase/reductase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCATGTCCTGTCATGCGATGTCCCTGGCAGTTTCCGGCCCAACTCAG
Internal bar code:AGGGTTTAACTGTAACTGTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1748
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCGCATTAAAGGATCGG
Suggested primer 2:CTATACAGGCACGCATCGGT