Insertion junction: CLIP2.067755_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067755
Chromosome:chromosome 10
Location:6497180
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g465250 PF25,RSP11 (1 of 2) PF02197 - Regulatory subunit of type II PKA R-subunit (RIIa); Radial Spoke Protein 11 5'UTR
Cre10.g465300 (1 of 89) 3.6.4.13 - RNA helicase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAACCGCCTCGACTTGGTCTTCGCAGATTGTTACGCATACCAGCATAC
Internal bar code:CATCGTCAGTCAAACTATTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1053
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGATACCCCAGACGCCAC
Suggested primer 2:GTGAACGCAGCAAGGACATG