Insertion junction: CLIP2.067766_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067766
Chromosome:chromosome 9
Location:995786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402500 ATPVA2,ATPvA2 Vacuolar ATP synthase subunit A; (1 of 3) K02154 - V-type H+-transporting ATPase subunit a (ATPeV0A, ATP6N) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTAAACCTTCAATTGTATTTGCTATCAGAAAGGAGGCATGTGCCCGGT
Internal bar code:CATTGTATAACCGTATGGCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1165
LEAP-Seq percent confirming:58.3333
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAGACTTGCAGCCTGGTG
Suggested primer 2:CTCTCGCTGGGGATAAGCAG