Insertion junction: CLIP2.067770_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067770
Chromosome:chromosome 3
Location:2101530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156500 (1 of 1) IPR000104//IPR016084 - Antifreeze protein, type I // Haem oxygenase-like, multi-helical 3'UTR
Cre03.g156550 (1 of 1) PTHR22829//PTHR34826 - DEP DOMAIN PROTEIN // FAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCCTTGACCCCGCTGCATGTCCTGCCATGTCTCCCTAGTCCTTGTGC
Internal bar code:CCCGGGTGTAGCGTTAACGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2123
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGAGTTGGTTGCGGAGG
Suggested primer 2:TTCCAGGATGCAGAGGAGGA