Insertion junction: CLIP2.067774_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067774
Chromosome:chromosome 12
Location:9327424
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541950 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCATGGGGTCTGGCCCTTTGTTTCCAACCCCCCCCGGTTGTGGCTTT
Internal bar code:GATAAGAATGTGTACTATGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:994
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAAGCTGCCAAGGTTTG
Suggested primer 2:CATACGCATTGACACGGCTG