Insertion junction: CLIP2.067790_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067790
Chromosome:chromosome 3
Location:6311932
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192201 PHC51 Pherophorin-chlamydomonas homolog 51; (1 of 71) PF12499 - Pherophorin (DUF3707) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGGAAGCAAGGGGAGCTGCGTGTTGGGTGTCCGGTGCGTGCTTGTACC
Internal bar code:AAGGGAACGGGGAGCGTTTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1028
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGCGGTGTCAGTTCTCC
Suggested primer 2:GCCACTCTGTGCTTCTCACT