Insertion junction: CLIP2.067797_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.067797
Chromosome:chromosome 7
Location:5010829
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347400 (1 of 2) K11135 - Pin2-interacting protein X1 (PINX1) 3'UTR
Cre07.g347450 (1 of 4) PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGTCCTGCTGAATGGGCACGCCACGGTTAGCCACTGCCACCACCCGCC
Internal bar code:AGACCATGTTGAGCTACCCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1859
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCAAAAAGGACAAGCAGG
Suggested primer 2:CCGCAGCCTCCTTCTCTAAG