Insertion junction: CLIP2.067805_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067805
Chromosome:chromosome 2
Location:6190828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g120250 CDPK7,STT7 (1 of 3) PTHR11584:SF316 - SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC; Chloroplast protein kinase required for state transitions 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCACATGAGTAGGCGGTCGCAGGATGGAGCGCTGGGTTGACCTGTGGG
Internal bar code:GGTAGGGAGCCACCGTTTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1232
LEAP-Seq percent confirming:59.0909
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCTTCCTGATGCGCCCAT
Suggested primer 2:AACCTGCTGGGAGTCTTTCG