Insertion junction: CLIP2.067807_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067807
Chromosome:chromosome 7
Location:5935508
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g354250 PGK2 (1 of 2) PF00162 - Phosphoglycerate kinase (PGK); Phosphoglycerate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAGGGCAAGCCGCAACAGTGTGCAGCATTGCAACGTGGCACGGGGCGA
Internal bar code:AGATGTGATCGTGTGGAATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3371
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGAGCTGGAGGTAGGTA
Suggested primer 2:ACAGTTCACGATGCGCTACA