Insertion junction: CLIP2.067808_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067808
Chromosome:chromosome 12
Location:8641793
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g548100 UBC7 (1 of 11) PF00632 - HECT-domain (ubiquitin-transferase) (HECT); Putative Ubiquitin-protein ligase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCGCATGCCTCAACCGCGTTGTGCAGCCGCTGCTCACGCACATCACG
Internal bar code:GAAGTTTATTGTTCCTGAAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:329
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTGTTAGGGCGTTGGAG
Suggested primer 2:CAGTGGACAGACGTCGTCAA