Insertion junction: CLIP2.067814_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067814
Chromosome:chromosome 9
Location:579227
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre18.g748347 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCATCATTAGCAAGTGTCTCCACACCTTGCTGCCAGCACGCGTCCAGC
Internal bar code:CAGGAGTCACACGTGTGTCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:778
LEAP-Seq percent confirming:39.2857
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TTACACAACGGCCGTGATGA
Suggested primer 2:CGTAGTTGCGGCTTGATTGG