Insertion junction: CLIP2.067816_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067816
Chromosome:chromosome 9
Location:5871175
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g411800 outside_mRNA
Cre09.g411850 (1 of 2) PTHR23130:SF61 - DEFENSE PROTEIN L(2)34FC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCACCTGCACACGCTGCACAAAAGGGACGACCCCTTCCCGCCGCGGA
Internal bar code:TGGATTTAGATCTACGCCAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:302
LEAP-Seq percent confirming:5.55556
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACCTGCAGAAGTACGGT
Suggested primer 2:TCAGACAGCGAGAAACGTCC