Insertion junction: CLIP2.067829_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067829
Chromosome:chromosome 4
Location:3511882
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g228000 (1 of 1) PF13890 - Rab3 GTPase-activating protein catalytic subunit (Rab3-GTPase_cat) outside_mRNA
Cre04.g228050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCAACGGTCATCATCGTTCACGACCGTTGGGGCGGTCAACCACTCTC
Internal bar code:TGCGTATGACACCCCGCCAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1350
LEAP-Seq percent confirming:58.9744
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGGTGGTGATTGACAGA
Suggested primer 2:ATGCTCTGGGTTGAGGATGC