Insertion junction: CLIP2.067835_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067835
Chromosome:chromosome 6
Location:1069040
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g257300 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAACGTATCAATGTGGGTCCAAAACGCACCTGGAGACCAAAAGTCGCC
Internal bar code:GTTGTACGTTACTTCGGTGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1369
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TATGCATTATAGCCCGCCGG
Suggested primer 2:CGTGTACATGCAGATTGCCG