Insertion junction: CLIP2.067843_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067843
Chromosome:chromosome 1
Location:245950
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g001550 CIF3,TIF3A,TIF3 (1 of 1) K02520 - translation initiation factor IF-3 (infC, MTIF3); Chloroplast translation initiation factor 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGGCTGCCACGAGGTGTGAGCGGGGGCTGTCCACCCGTGTATTCCTG
Internal bar code:AGTTGTGGTATAAGTCCGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:187
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTAGGTGCCGGTCTTGAA
Suggested primer 2:CTGTGGTGCACTGGGGTTAT