Insertion junction: CLIP2.067848_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067848
Chromosome:chromosome 3
Location:4117320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172600 (1 of 1) IPR000104//IPR001841//IPR011990//IPR013083 - Antifreeze protein, type I // Zinc finger, RING-type // Tetratricopeptide-like helical domain // Zinc finger, RING/FYVE/PHD-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATAAGCGGCTGTCCTGCATCAACACTTTACTGCGGTGTACAGAGCTCG
Internal bar code:ACTAGGGTAAGAGCCTGCCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2218
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCAGCAGCTTGTTGATGG
Suggested primer 2:AAGTAGTAGTCGGCGGAGGT