Insertion junction: CLIP2.067849_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067849
Chromosome:chromosome 7
Location:1046107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319800 (1 of 1) IPR000104//IPR009148 - Antifreeze protein, type I // Streptococcal non-M secreted SibA 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAATGCGAAGAAGTTTACGCTACTCATGACAGCTGCCCCACAACACTTC
Internal bar code:CTCGTATAGGGCGCGGGCTGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2388
LEAP-Seq percent confirming:98.6487
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAACTTCGACTTGCGTG
Suggested primer 2:GGCTACGGCTCTAGCAGTTT