Insertion junction: CLIP2.067849_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067849
Chromosome:chromosome 7
Location:1046111
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319800 (1 of 1) IPR000104//IPR009148 - Antifreeze protein, type I // Streptococcal non-M secreted SibA 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACATCCAACTTCTTTGGTTCTGCATTATATGATGGCGTATGCCTCATC
Internal bar code:CTTTCATCTCCGTTCCAGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:5497
LEAP-Seq percent confirming:94.3548
LEAP-Seq n confirming:117
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:124

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTACGGCTCTAGCAGTTT
Suggested primer 2:CCACAACTTCGACTTGCGTG