Insertion junction: CLIP2.067857_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067857
Chromosome:chromosome 1
Location:2318554
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013000 (1 of 1) 2.7.7.31 - DNA nucleotidylexotransferase / Terminal transferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGAATCCAGGTGACCGACGACGCCTGAAATTTAATTTTATTGCGTCA
Internal bar code:CAGGAGTATGTAGCTGGCTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2321
LEAP-Seq percent confirming:96.3415
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATTTACCATGCGGCGAC
Suggested primer 2:CACGATTTGCTAATGGGCCG