Insertion junction: CLIP2.067859_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067859
Chromosome:chromosome 7
Location:1045402
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319750 HEL35 (1 of 1) K14807 - ATP-dependent RNA helicase DDX51/DBP6 [EC:3.6.4.13] (DDX51, DBP6); DEAD box ATP-dependent RNA helicase 3'UTR
Cre07.g319800 (1 of 1) IPR000104//IPR009148 - Antifreeze protein, type I // Streptococcal non-M secreted SibA outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAAGGTGGTGGGATGTGTTACGGCAGGTGCTGGTTGGATATGGTCCA
Internal bar code:TGATTGTGTTATTGTGTAACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3456
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGATAGTTGGTTGGCGA
Suggested primer 2:GAGCAGGAGACTCAACACCC