Insertion junction: CLIP2.067861_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.067861
Chromosome:chromosome 13
Location:4926540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605550 (1 of 6) 2.7.7.84 - 2'-5' oligoadenylate synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAGTAAACATAGCGGCGGCACCTGCAATTACTGCGGTCAAGTAAATGC
Internal bar code:GTCGAGCGTTGTGAGGGGCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1788
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCTTTTCACTGCTGCAG
Suggested primer 2:CCTGCAGTGCTGGTACAAGA