Insertion junction: CLIP2.067872_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067872
Chromosome:chromosome 10
Location:3323341
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443300 CNK5 NimA-related protein kinase; (1 of 1) PTHR24361//PTHR24361:SF368 - MITOGEN-ACTIVATED KINASE KINASE KINASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTACCTCACCCAGCAGAAATCCGCCCTACAATGCACCCACCAGCTCCA
Internal bar code:TGTTTACCTAAGGGTTTGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1217
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACGACTACCTCAGCCGA
Suggested primer 2:TTTGCCCGAATCCTCCTTCC