Insertion junction: CLIP2.067875_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067875
Chromosome:chromosome 10
Location:1187291
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g425950 (1 of 1) PTHR31423//PTHR31423:SF3 - FAMILY NOT NAMED // PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGACCGGCTTCAGGCTGTGGACTACTGGACCCGGCAGCACGGGCGAT
Internal bar code:TCTCTCAAAATCGGCGCCCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:274
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGAGACGTCGTGTTCACA
Suggested primer 2:CGCATGTCAGGCAATGTACG