Insertion junction: CLIP2.067876_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067876
Chromosome:chromosome 11
Location:2198260
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467726 (1 of 1) K06316 - oligosaccharide translocation protein RFT1 (RFT1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGATAATACCACCCGGCCAGACACCCGGCCACGCCGATGCGTCCTTCA
Internal bar code:GTACAGGTGTGTTTGCTGGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3530
LEAP-Seq percent confirming:96.8421
LEAP-Seq n confirming:184
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:190

Suggested primers for confirmation by PCR

Suggested primer 1:CGTATCAGCATAGGGGCCTG
Suggested primer 2:CAATGAAGCCGCTCGTTAGC