Insertion junction: CLIP2.067880_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067880
Chromosome:chromosome 10
Location:2789492
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438500 CPK3,MOT54,FAP264 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype; Flagellar Associated Protein 264 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGGAGCATTATTTGAATTCTAGCAAACACCTACAGAATACACCGTTGC
Internal bar code:AGACGAACATCACTAATTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1414
LEAP-Seq percent confirming:49.2958
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGTCCAAGTACCGCATG
Suggested primer 2:CGCTGCACATGTACACGATG