Insertion junction: CLIP2.067881_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067881
Chromosome:chromosome 12
Location:5520742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g530400 CrZIP13,IRT1,ZIP11 Iron-nutrition responsive ZIP family Fe transporter; (1 of 5) K07238 - zinc transporter, ZIP family (TC.ZIP, zupT, ZRT3, ZIP2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTTCGCGAGGTCGCGCCGGCGACGTCCCAACCACCTAACTGCACTGA
Internal bar code:CTGTACGACTAACTAGACAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3897
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:TGAACCAGCACGCACCATAT
Suggested primer 2:TCAGGTTGAATCGCTCGCTT