Insertion junction: CLIP2.067882_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067882
Chromosome:chromosome 6
Location:3000811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g274150 HFO32,HFO6,HFO31,HFO43 (1 of 33) K11254 - histone H4 (H4); Histone H4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTTCCATCTGTTTTCGCCACCAACTCACATCGGTGACAGGAACCGTAA
Internal bar code:CCACGGAGTATGTCTTTCTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1188
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGACTGTGGGAGAGTTG
Suggested primer 2:AGGCGAAAAGATTCCTGGCA