Insertion junction: CLIP2.067888_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067888
Chromosome:chromosome 10
Location:4728708
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre10.g452450 TIC110 Chloroplast envelope protein; (1 of 1) PF16940 - Chloroplast envelope transporter (Tic110) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACACACACACACACACACACACACAGCAAGTCCGGCCCAGGGCCCCCC
Internal bar code:CTCGGGTTGGAGTGGCGTTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:410
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGTGCCCATATGCATGC
Suggested primer 2:CTCCATCTCCCTCTTCCCCA