Insertion junction: CLIP2.067891_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067891
Chromosome:chromosome 10
Location:2583264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g436700 (1 of 21) PF02469 - Fasciclin domain (Fasciclin) 3'UTR
Cre10.g436800 (1 of 2) PF01833//PF07691//PF10162 - IPT/TIG domain (TIG) // PA14 domain (PA14) // G8 domain (G8) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCAACGCTTGCCTAGCACTCGCCCCATTGCGCAGAGGCTTGGCTGGCA
Internal bar code:AAGAACATAACTTACAACGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:959
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTTGAAGCACGTACTGA
Suggested primer 2:ATCTCCACTGGCAACGTCAG