Insertion junction: CLIP2.067896_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067896
Chromosome:chromosome 2
Location:7493592
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392616 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTTGAAACGCTGCAGTTTGTGCGGGGCACAACGCGTGCGAACCCGAAT
Internal bar code:TCGATTACCTATTTACTACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1895
LEAP-Seq percent confirming:60.7143
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CGCACCGTATAGTACTGCGT
Suggested primer 2:CGCGGAGATGAGGGATAACC