Insertion junction: CLIP2.067906_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067906
Chromosome:chromosome 16
Location:4790580
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687650 ANK20 Predicted protein with ankyrin repeats; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGAATGCGGATGTTACAGAGGGGACAGTCCCAGCACCCGAAGACGCCG
Internal bar code:CTCTGTTCAGGAAGGGCGCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3943
LEAP-Seq percent confirming:40.2174
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:55
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTTTTGGGACTGCACTGT
Suggested primer 2:GTGAAAAGGCCCAAGCAAGG