Insertion junction: CLIP2.067911_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067911
Chromosome:chromosome 16
Location:3559372
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g669193 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGACGCGGGCTTCATGCTGGGGGACCGCATGGGTATGTGGGCCTCAGG
Internal bar code:ATGCGGGTTTTTTGGCTATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:608
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGTACTCATGGGCGCCAG
Suggested primer 2:ACAATAACCCGGTGGCTCTG