Insertion junction: CLIP2.067912_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067912
Chromosome:chromosome 8
Location:377405
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358579 (1 of 1) PTHR10984:SF32 - ENDOPLASMIC RETICULUM VESICLE TRANSPORTER PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTCCAGTGCATATAGTTGAGTCGCCCCTCAAGGGCGCACTCCGCTGAA
Internal bar code:GGCAGATTCTAACAGGCGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:668
LEAP-Seq percent confirming:70.2128
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GATTAGGCGGGATGAGGTGG
Suggested primer 2:GCGGGGTCATATAAGTCGGG