Insertion junction: CLIP2.067916_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067916
Chromosome:chromosome 10
Location:2344647
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g434600 TRP21,FAP148 (1 of 1) PTHR22847//PTHR22847:SF493 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED; Cation Channel Domain Flagellar Associated Protein 148 outside_mRNA
Cre10.g434650 CTR3 Copper transport accessory protein; (1 of 1) PTHR12483//PTHR12483:SF27//PTHR12483:SF34 - SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS // COPPER TRANSPORTER 1A, ISOFORM C-RELATED // PROTEIN P80 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCTGTGCGTGTGTCGCTCGCGTTGGCCAAGGCCCAAGGGCCGCCCTCG
Internal bar code:GCTTCTATCGTCCGGGCTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2977
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCTTGGCGTGTTTTGCTT
Suggested primer 2:ACCCTCAAGATTCAGGCACG