Insertion junction: CLIP2.067928_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067928
Chromosome:chromosome 3
Location:6786581
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196900 (1 of 1) PTHR10809:SF6 - AT11025P-RELATED 3'UTR
Cre03.g196950 (1 of 4) PTHR16222//PTHR16222:SF17 - ADP-RIBOSYLGLYCOHYDROLASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTGCGGATGTGCTGCCGGGTTAAACATATAGATTGCAGACTGACCAG
Internal bar code:GTGTCCTATAGGACTGCAGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3811
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACAATGGTCACGGACTG
Suggested primer 2:ACGTACTTGCCACTGCGTTA