Insertion junction: CLIP2.067931_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067931
Chromosome:chromosome 6
Location:3532328
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800658 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGACATCTTGACTTTCGCGAGGTCGCGAGGTCGCAAGGAAAGCAGCC
Internal bar code:GATATCCTACCATCAACTAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:853
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAACATGCAAACAGGGCG
Suggested primer 2:GCCACCTCCTTGTTAGCCAT