Insertion junction: CLIP2.067936_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067936
Chromosome:chromosome 17
Location:4888868
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g735021 (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTCATCGTGTGTGCGCGCGCACAAACGTGCAGCGTGTTCTTTACAGT
Internal bar code:TTCGGGTGATAGACGGTGTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:144
LEAP-Seq percent confirming:31.25
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CATTAGGAAACAGTCGCGCG
Suggested primer 2:CCCTCTCATCTCGCGAAGAC