Insertion junction: CLIP2.067940_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067940
Chromosome:chromosome 9
Location:6327875
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414150 GT90F42,GT90-42 GT90 family protein 42; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGAGCTTTAGGAGAGCATTACGCACGTATTATAATTTTTTAAGGGGG
Internal bar code:GGCAATTCGCGTTCCAGGAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3623
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCTAGTTCTGCTTCGTT
Suggested primer 2:ACTCGTGCGTGAACAGATGT