Insertion junction: CLIP2.067958_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067958
Chromosome:chromosome 5
Location:998966
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g247250 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCTTGGTGTCTAAAGCGCTGTTGTGAAGCCGGCAAAGCTACCGGCAA
Internal bar code:CTGTGCACCATGGGATCGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2560
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGTGCTTGCGTTTGATG
Suggested primer 2:CTCTCGTGGTGTGAACGTCA