Insertion junction: CLIP2.067960_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067960
Chromosome:chromosome 11
Location:945137
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467659 (1 of 1) K15128 - mediator of RNA polymerase II transcription subunit 6 (MED6) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGACTGTTCATGCTTATCTGTTGTGAAAAGTGTTGTCGCTCCGGCATTT
Internal bar code:GTGAGCTGATCATGAAGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2689
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCTGAGAGCTCGACGAC
Suggested primer 2:AATTGGGGATTCAGCAGGGG