Insertion junction: CLIP2.067961_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067961
Chromosome:chromosome 9
Location:3173628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394436 (1 of 1) PF03030 - Inorganic H+ pyrophosphatase (H_PPase) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAGAACTGCTTTCGTTGCCGCTGCTGTGGCTGTAAGCGCGCTACTGTC
Internal bar code:GCGTTGAATGCGTGCCAGCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1475
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGCGAAGGTTGGTGAAC
Suggested primer 2:AATCGTGACAGCCAACGTCT